Naoto Hori

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Major conferences

  1. Feb. 2017  Biophysical Society 61th Annual Meeting   [New Orleans, US]
    Multistep folding kinetics of group I intron RNA studied by Mg2+-concentration jump simulations   [Abstruct]
    Naoto Hori, Natalia A. Denesyuk and D Thirumalai

  2. Mar. 2016  Biophysical Society 60th Annual Meeting   [Los Angeles, US]
    Mechanical force and salt effects on the thermodynamics of a frameshifting RNA pseudoknot.    [Abstruct]
    Naoto Hori, Natalia A. Denesyuk and D Thirumalai

  3. Nov. 2013  The 49th Annual Meeting of the Biophysical Society of Japan  [Kyoto, Japan]
    Molecular simulation study on signaling control in yeast MAPK pathway
    Naoto Hori and Shoji Takada

  4. Feb. 2013  Biophysical Society 57th Annual Meeting   [Pennsylvania, US]
    Molecular dynamics of tRNA bound to translating ribosome studied by coarse-grained simulations
    Naoto Hori and Shoji Takada

  5. Sep. 2012  The 50th Annual Meeting of the Biophysical Society of Japan  [Nagoya, Japan]
    Dynamical motions of tRNA and ribosome complex during translation elongation studied by coarse-grained molecular simulations   
    Naoto Hori and Shoji Takada

  6. Jul. 2012  The 14th Annual Meeting of the RNA Society of Japan  [Sendai, Japan]
    Mechanisms and Relation of Ribosomal Subunit Rotation and tRNA Hybrid State Formation Studied by Molecular Simulations   
    Naoto Hori and Shoji Takada

  7. Feb. 2012  Biophysical Society 56th Annual Meeting   [San Diego, US]
    Mechanisms and Relation of Ribosomal Subunit Rotation and tRNA Hybrid State Formation Studied by Molecular Simulations   [Abstruct]
    Naoto Hori and Shoji Takada

  8. Jan. 2012  The 5th International Symposium on Molecular Science of Fluctuations toward Biological Functions  [Nara, Japan]
    Fluctuations of Transfer RNAs in the Ribosome Cavity Studied by Coarse-Grained Simulations   
    Naoto Hori and Shoji Takada

  9. Sep. 2011  The 49th Annual Meeting of the Biophysical Society of Japan  [Himeji, Japan]
    Coarse-grained molecular simulation study of ribosomal translocation dynamics   CiNii
    Naoto Hori and Shoji Takada

  10. Sep. 2011  The 2nd international symposium on "Multi-scale Simulations of Biological and Soft Materials" (MSBSM 2011)  [Kyoto, Japan]
    Coarse-grained model of RNA-protein complexes derived by multiscale simulation method   
    Naoto Hori and Shoji Takada

  11. Jun. 2011  The 16th Annual Meeting of the RNA Society  [Kyoto, Japan]
    Ribosome and tRNA Dynamics during Elongation Studied by Coarse-Grained Molecular Simulations   
    Naoto Hori and Shoji Takada

  12. Jun. 2011  The 11th Annual Meeting of the Protein Science Society of Japan  [Osaka, Japan]
    Coarse-grained simulation study of ribosome and tRNA dynamics   
    Naoto Hori and Shoji Takada

  13. Sep. 2010  The 48th Annual Meeting of the Biophysical Society of Japan  [Sendai, Japan]
    Coarse-grained model of RNA-protein complexes based on all-atom simulations   CiNii
    Naoto Hori, Wenfei Li, and Shoji Takada

  14. Jun. 2010  The 10th Annual Meeting of the Protein Science Society of Japan  [Sapporo, Japan]
    Coarse-grained model of RNA-protein complexes based on all-atom simulations 
    Naoto Hori, Wenfei Li, and Shoji Takada

  15. Nov. 2009  The 47th Annual Meeting of the Biophysical Society of Japan  [Tokushima, Japan]
    Replica exchange simulations applied for coarse-grained models of giant protein-nucleic acid complex   CiNii
    Naoto Hori, Hiroo Kenzaki, and Shoji Takada

  16. Dec. 2007  The 45th Annual Meeting of the Biophysical Society of Japan  [Yokohama, Japan]
    Network and energy landscape of a folding protein revealed by multicanonical fragment assembly simulations   CiNii
    Naoto Hori and Shoji Takada

  17. Sep. 2007  The 62th Annual Meeting of the Physical Society of Japan  [Sapporo, Japan]
    Energy landscape of folding proteins revealed by Wang-Landau sampling   CiNii
    Naoto Hori and Shoji Takada

  18. Dec. 2006  Discussion on "Theory and Simulation of Biomolecular Nano-machine"  [Maiko, Japan]
    Energy landscape and network of protein folding revealed by large-scale multicanonical fragment assembly simulations 
    Naoto Hori and Shoji Takada

  19. Nov. 2006  The 5th East Asian Biophysics Symposium & 44th Annual Meeting of the Biophysical Society of Japan  [Okinawa, Japan]
    Energy landscape of folding proteins revealed by large-scale multicanonical fragment assembly simulations   CiNii
    Naoto Hori, George Chikenji, and Shoji Takada

Other Meetings

  1. Jul. 2010  The 29th Study Meeting on Theory of Protein and Nucleic Acid Structure  [Tsukuba, Japan]
    A development of coarse-grained simulation model of RNA 
    Naoto Hori

  2. Jul. 2009  The 28th Study Meeting on Theory of Protein and Nucleic Acid Structure  [Kobe, Japan]
    A Study on Energy Landscape of Protein Folding 
    Naoto Hori

  3. Nov. 2006  CASP7: "7th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction"  [Asilomar, US]
    Template-free Prediction by Fragment Assembly with SimFold Energy Function at CASP7 
    Sung-Joon Park, Naoto Hori, Kei-ichi Okazaki, and Shoji Takada 
    CASP7 Abstracts (2006) 99-101  PDF