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堀 直人

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テキサス大学オースティン校 化学科
Thirumalaiグループ 博士研究員

研究内容

論文

  1. Samanta, H.S. ; Zhuravlev, P.I. ; Hinczewski, M. ; Hori, N. ; Chakrabarti, S. ; Thirumalai, D.
    Protein Collapse is Encoded in the Folded State Architecture.
    Soft Matter (2017) 13(19): 3622-3638 arXiv:1608.06971
  2. Hori, N. ; Denesyuk, N.A. ; Thirumalai, D.
    Salt Effects on the Thermodynamics of a Frameshifting RNA Pseudoknot under Tension
    J. Mol. Biol. (2016) 428(14): 2847-2859   arXiv:1604.08278
  3. Tanaka, T ; Hori, N. ; Takada, S.
    How co-translational folding of multi-domain protein is affected by elongation schedule: Molecular simulations
    PLoS Comput. Biol. (2015) 11(7): e1004356  [PDF]
  4. Hori, N. ; Takada, S.
    Coarse-grained structure-based model for RNA-protein complexes developed by fluctuation matching
    J. Chem. Theory Comput. (2012) 8(9): 3384-3394
  5. Kenzaki, H. ; Koga, N. ; Hori, N. ; Kanada, R; Li, W. ; Okazaki, K. ; Yao, X.Q. ; Takada, S.
    CafeMol: A coarse-grained biomolecular simulator for simulating proteins at work
    J. Chem. Theory Comput. (2011) 7(6): 1979-1989
  6. Li, W. ; Yoshii, H. ; Hori, N. ; Kameda, T. ; Takada, S.
    Multiscale methods for protein folding simulations
    Methods (2010) 52: 106-114
  7. Hori, N. ; Chikenji, G. ; Berry, R.S. ; Takada, S.
    Folding energy landscape and network dynamics of small globular proteins
    Proc. Natl. Acad. Sci. USA (2009) 106: 73-78  [PDF]

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